MethaPath

Description

MetaPath is a software for pathogens and their AMR spectrum profiling on long reads clinical metagenomic data. It takes fastq or fasta read file as input. The final output is a table consisting of detected high abundant taxa and their relative abundance.

Link

oasis-lmc.org/products/software/metapath.aspx

Type

Software

Subtypes

Evaluation Tool

Focuses

Generally applicable

Topics

Data analysis

Contacts

Prof. Dr. Alice McHardy

Helmholtz Centre for Infection Research

Deputy Coordinator Bioinformatics and Machine Learning

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User groups / addressees

Scientists

keywords

Analyses

Preview image

File type

webpage

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